Fisseha Berhane, PhD
Data Scientist
443-970-2353
[email protected]
CV Resume 
443-970-2353
[email protected]
CV Resume
This lab covers the steps for creating a click-through rate (CTR) prediction pipeline. You will work with the Criteo Labs dataset that was used for a recent Kaggle competition.
This lab will cover:
Part 1: Featurize categorical data using one-hot-encoding (OHE)
Part 2: Construct an OHE dictionary
Part 3: Parse CTR data and generate OHE features
Part 4: CTR prediction and logloss evaluation
Part 5: Reduce feature dimension via feature hashing
Note that, for reference, you can look up the details of:
- the relevant Spark methods in PySpark's DataFrame API
- the relevant NumPy methods in the NumPy Reference
The same lab with cell outputs is available here.
from databricks_test_helper import Test
We would like to develop code to convert categorical features to numerical ones, and to build intuition, we will work with a sample unlabeled dataset with three data points, with each data point representing an animal. The first feature indicates the type of animal (bear, cat, mouse); the second feature describes the animal's color (black, tabby); and the third (optional) feature describes what the animal eats (mouse, salmon).
In a one-hot-encoding (OHE) scheme, we want to represent each tuple of (featureID, category) via its own binary feature. We can do this in Python by creating a dictionary that maps each tuple to a distinct integer, where the integer corresponds to a binary feature. To start, manually enter the entries in the OHE dictionary associated with the sample dataset by mapping the tuples to consecutive integers starting from zero, ordering the tuples first by featureID and next by category.
Later in this lab, we'll use OHE dictionaries to transform data points into compact lists of features that can be used in machine learning algorithms.
# By default, when a shuffle operation occurs with DataFrames, the post-shuffle partition
# count is 200. This is controlled by Spark configuration value spark.sql.shuffle.partitions.
# 200 is a little too high for this data set, so we set the post-shuffle partition count to
# twice the number of available threads in Community Edition.
sqlContext.setConf('spark.sql.shuffle.partitions', '6') # Set default partitions for DataFrame operations
from collections import defaultdict
# Data for manual OHE
# Note: the first data point does not include any value for the optional third feature
sample_one = [(0, 'mouse'), (1, 'black')]
sample_two = [(0, 'cat'), (1, 'tabby'), (2, 'mouse')]
sample_three = [(0, 'bear'), (1, 'black'), (2, 'salmon')]
def sample_to_row(sample):
tmp_dict = defaultdict(lambda: None)
tmp_dict.update(sample)
return [tmp_dict[i] for i in range(3)]
sqlContext.createDataFrame(map(sample_to_row, [sample_one, sample_two, sample_three]),
['animal', 'color', 'food']).show()
sample_data_df = sqlContext.createDataFrame([(sample_one,), (sample_two,), (sample_three,)], ['features'])
sample_data_df.show(truncate=False)
# TODO: Replace <FILL IN> with appropriate code
sample_ohe_dict_manual = {}
sample_ohe_dict_manual[(0, 'bear')] = 0
sample_ohe_dict_manual[(0, 'cat')] = 1
sample_ohe_dict_manual[(0, 'mouse')] =2
sample_ohe_dict_manual[(1, 'black')] = 3
sample_ohe_dict_manual[(1, 'tabby')] = 4
sample_ohe_dict_manual[(2, 'mouse')] = 5
sample_ohe_dict_manual[(2, 'salmon')] = 6
# TEST One-hot-encoding (1a)
Test.assertEqualsHashed(sample_ohe_dict_manual[(0, 'bear')],
'b6589fc6ab0dc82cf12099d1c2d40ab994e8410c',
"incorrect value for sample_ohe_dict_manual[(0,'bear')]")
Test.assertEqualsHashed(sample_ohe_dict_manual[(0, 'cat')],
'356a192b7913b04c54574d18c28d46e6395428ab',
"incorrect value for sample_ohe_dict_manual[(0,'cat')]")
Test.assertEqualsHashed(sample_ohe_dict_manual[(0, 'mouse')],
'da4b9237bacccdf19c0760cab7aec4a8359010b0',
"incorrect value for sample_ohe_dict_manual[(0,'mouse')]")
Test.assertEqualsHashed(sample_ohe_dict_manual[(1, 'black')],
'77de68daecd823babbb58edb1c8e14d7106e83bb',
"incorrect value for sample_ohe_dict_manual[(1,'black')]")
Test.assertEqualsHashed(sample_ohe_dict_manual[(1, 'tabby')],
'1b6453892473a467d07372d45eb05abc2031647a',
"incorrect value for sample_ohe_dict_manual[(1,'tabby')]")
Test.assertEqualsHashed(sample_ohe_dict_manual[(2, 'mouse')],
'ac3478d69a3c81fa62e60f5c3696165a4e5e6ac4',
"incorrect value for sample_ohe_dict_manual[(2,'mouse')]")
Test.assertEqualsHashed(sample_ohe_dict_manual[(2, 'salmon')],
'c1dfd96eea8cc2b62785275bca38ac261256e278',
"incorrect value for sample_ohe_dict_manual[(2,'salmon')]")
Test.assertEquals(len(sample_ohe_dict_manual.keys()), 7,
'incorrect number of keys in sample_ohe_dict_manual')
Data points can typically be represented with a small number of non-zero OHE features relative to the total number of features that occur in the dataset. By leveraging this sparsity and using sparse vector representations for OHE data, we can reduce storage and computational burdens. Below are a few sample vectors represented as dense numpy arrays. Use SparseVector to represent them in a sparse fashion, and verify that both the sparse and dense representations yield the same results when computing dot products (we will later use MLlib to train classifiers via gradient descent, and MLlib will need to compute dot products between SparseVectors and dense parameter vectors).
Use SparseVector(size, *args) to create a new sparse vector where size is the length of the vector and args is either:
SparseVectors are much more efficient when working with sparse data because they do not store zero values (only store non-zero values and their indices). You'll need to create a sparse vector representation of each dense vector a_dense and b_dense.
import numpy as np
from pyspark.mllib.linalg import SparseVector
# TODO: Replace <FILL IN> with appropriate code
a_dense = np.array([0., 3., 0., 4.])
a_sparse = SparseVector(4, [(1,3), (3,4)])
b_dense = np.array([0., 0., 0., 1.])
b_sparse = SparseVector(4, [(3,1)])
w = np.array([0.4, 3.1, -1.4, -.5])
print a_dense.dot(w)
print a_sparse.dot(w)
print b_dense.dot(w)
print b_sparse.dot(w)
# TEST Sparse Vectors (1b)
Test.assertTrue(isinstance(a_sparse, SparseVector), 'a_sparse needs to be an instance of SparseVector')
Test.assertTrue(isinstance(b_sparse, SparseVector), 'a_sparse needs to be an instance of SparseVector')
Test.assertTrue(a_dense.dot(w) == a_sparse.dot(w),
'dot product of a_dense and w should equal dot product of a_sparse and w')
Test.assertTrue(b_dense.dot(w) == b_sparse.dot(w),
'dot product of b_dense and w should equal dot product of b_sparse and w')
Test.assertTrue(a_sparse.numNonzeros() == 2, 'a_sparse should not store zero values')
Test.assertTrue(b_sparse.numNonzeros() == 1, 'b_sparse should not store zero values')
Now let's see how we can represent the OHE features for points in our sample dataset. Using the mapping defined by the OHE dictionary from Part (1a), manually define OHE features for the three sample data points using SparseVector format. Any feature that occurs in a point should have the value 1.0. For example, the DenseVector for a point with features 2 and 4 would be [0.0, 0.0, 1.0, 0.0, 1.0, 0.0, 0.0].
# Reminder of the sample features
# sample_one = [(0, 'mouse'), (1, 'black')]
# sample_two = [(0, 'cat'), (1, 'tabby'), (2, 'mouse')]
# sample_three = [(0, 'bear'), (1, 'black'), (2, 'salmon')]
# TODO: Replace <FILL IN> with appropriate code
sample_one_ohe_feat_manual = SparseVector(7, [(2,1), (3,1)])
sample_two_ohe_feat_manual = SparseVector(7, [(1,1),(4,1),(5,1)])
sample_three_ohe_feat_manual = SparseVector(7,[(0,1),(3,1),(6,1)])
# TEST OHE Features as sparse vectors (1c)
Test.assertTrue(isinstance(sample_one_ohe_feat_manual, SparseVector),
'sample_one_ohe_feat_manual needs to be a SparseVector')
Test.assertTrue(isinstance(sample_two_ohe_feat_manual, SparseVector),
'sample_two_ohe_feat_manual needs to be a SparseVector')
Test.assertTrue(isinstance(sample_three_ohe_feat_manual, SparseVector),
'sample_three_ohe_feat_manual needs to be a SparseVector')
Test.assertEqualsHashed(sample_one_ohe_feat_manual,
'ecc00223d141b7bd0913d52377cee2cf5783abd6',
'incorrect value for sample_one_ohe_feat_manual')
Test.assertEqualsHashed(sample_two_ohe_feat_manual,
'26b023f4109e3b8ab32241938e2e9b9e9d62720a',
'incorrect value for sample_two_ohe_feat_manual')
Test.assertEqualsHashed(sample_three_ohe_feat_manual,
'c04134fd603ae115395b29dcabe9d0c66fbdc8a7',
'incorrect value for sample_three_ohe_feat_manual')
Next we will use the OHE dictionary from Part (1a) to programatically generate OHE features from the original categorical data. First write a function called one_hot_encoding that creates OHE feature vectors in SparseVector format. Then use this function to create OHE features for the first sample data point and verify that the result matches the result from Part (1c).
Note: We'll pass in the OHE dictionary as a Broadcast variable, which will greatly improve performance when we call this function as part of a UDF. When accessing a broadcast variable, you must use
.value. For instance:ohe_dict_broadcast.value.
# TODO: Replace <FILL IN> with appropriate code
def one_hot_encoding(raw_feats, ohe_dict_broadcast, num_ohe_feats):
"""Produce a one-hot-encoding from a list of features and an OHE dictionary
Note:
You should ensure that the indices used to create a SparseVector are sorted.
Args:
raw_feats (list of (int, str)): The features corresponding to a single observation. Each
feature consists of a tuple of featureID and the feature's value. (e.g. sample_one)
ohe_dict_broadcast (Broadcast of dict): Broadcast variable containing a dict that maps
(featureID, value) to unique integer.
num_ohe_feats (int): The total number of unique OHE features (combinations of featureID and
value).
Returns:
SparseVector: A SparseVector of length num_ohe_feats with indices equal to the unique
identifiers for the (featureID, value) combinations that occur in the observation and
with values equal to 1.0.
"""
retObj = SparseVector(num_ohe_feats, [(ohe_dict_broadcast.value[ftrTpl], 1.) for ftrTpl in raw_feats])
return retObj
# Calculate the number of features in sample_ohe_dict_manual
num_sample_ohe_feats = len(sample_ohe_dict_manual.keys())
sample_ohe_dict_manual_broadcast = sc.broadcast(sample_ohe_dict_manual)
# Run one_hot_encoding() on sample_one. Make sure to pass in the Broadcast variable.
sample_one_ohe_feat = one_hot_encoding(sample_one, sample_ohe_dict_manual_broadcast, num_sample_ohe_feats)
print sample_one_ohe_feat
# TEST Define an OHE Function (1d)
Test.assertTrue(sample_one_ohe_feat == sample_one_ohe_feat_manual,
'sample_one_ohe_feat should equal sample_one_ohe_feat_manual')
Test.assertEquals(sample_one_ohe_feat, SparseVector(7, [2, 3], [1.0, 1.0]),
'incorrect value for sample_one_ohe_feat')
Test.assertEquals(one_hot_encoding([(1, 'black'), (0, 'mouse')], sample_ohe_dict_manual_broadcast,
num_sample_ohe_feats), SparseVector(7, [2, 3], [1.0, 1.0]),
'incorrect definition for one_hot_encoding')
Finally, use the function from Part (1d) to create OHE features for all 3 data points in the sample dataset. You'll need to generate a UDF that can be used in a DataFrame select statement.
Note: Your implemenation of
ohe_udf_generatorneeds to call yourone_hot_encodingfunction.
# TODO: Replace <FILL IN> with appropriate code
from pyspark.sql.functions import udf
from pyspark.mllib.linalg import VectorUDT
def ohe_udf_generator(ohe_dict_broadcast):
"""Generate a UDF that is setup to one-hot-encode rows with the given dictionary.
Note:
We'll reuse this function to generate a UDF that can one-hot-encode rows based on a
one-hot-encoding dictionary built from the training data. Also, you should calculate
the number of features before calling the one_hot_encoding function.
Args:
ohe_dict_broadcast (Broadcast of dict): Broadcast variable containing a dict that maps
(featureID, value) to unique integer.
Returns:
UserDefinedFunction: A UDF can be used in `DataFrame` `select` statement to call a
function on each row in a given column. This UDF should call the one_hot_encoding
function with the appropriate parameters.
"""
length = len(ohe_dict_broadcast.value.keys())
return udf(lambda x: one_hot_encoding(x, ohe_dict_broadcast, length), VectorUDT())
sample_ohe_dict_udf = ohe_udf_generator(sample_ohe_dict_manual_broadcast)
print sample_data_df.collect()
sample_ohe_df = sample_data_df.select(sample_ohe_dict_udf('features'))
sample_ohe_df.show(truncate=False)
# TEST Apply OHE to a dataset (1e)
sample_ohe_data_values = sample_ohe_df.collect()
Test.assertTrue(len(sample_ohe_data_values) == 3, 'sample_ohe_data_values should have three elements')
Test.assertEquals(sample_ohe_data_values[0], (SparseVector(7, {2: 1.0, 3: 1.0}),),
'incorrect OHE for first sample')
Test.assertEquals(sample_ohe_data_values[1], (SparseVector(7, {1: 1.0, 4: 1.0, 5: 1.0}),),
'incorrect OHE for second sample')
Test.assertEquals(sample_ohe_data_values[2], (SparseVector(7, {0: 1.0, 3: 1.0, 6: 1.0}),),
'incorrect OHE for third sample')
Test.assertTrue('one_hot_encoding' in sample_ohe_dict_udf.func.func_code.co_names,
'ohe_udf_generator should call one_hot_encoding')
(featureID, category)¶To start, create a DataFrame of distinct (feature_id, category) tuples. In our sample dataset, the 7 items in the resulting DataFrame are (0, 'bear'), (0, 'cat'), (0, 'mouse'), (1, 'black'), (1, 'tabby'), (2, 'mouse'), (2, 'salmon'). Notably 'black' appears twice in the dataset but only contributes one item to the DataFrame: (1, 'black'), while 'mouse' also appears twice and contributes two items: (0, 'mouse') and (2, 'mouse'). Use explode and distinct.
# TODO: Replace <FILL IN> with appropriate code
from pyspark.sql.functions import explode
sample_distinct_feats_df = (sample_data_df
.select(explode('features'))
.distinct())
# print sample_distinct_feats_df.collect()
sample_distinct_feats_df.show()
# TEST DataFrame with rows of `(featureID, category)` (2a)
Test.assertEquals(sorted(map(lambda r: r[0], sample_distinct_feats_df.collect())),
[(0, 'bear'), (0, 'cat'), (0, 'mouse'), (1, 'black'),
(1, 'tabby'), (2, 'mouse'), (2, 'salmon')],
'incorrect value for sample_distinct_feats_df')
Next, create an RDD of key-value tuples, where each (feature_id, category) tuple in sample_distinct_feats_df is a key and the values are distinct integers ranging from 0 to (number of keys - 1). Then convert this RDD into a dictionary, which can be done using the collectAsMap action. Note that there is no unique mapping from keys to values, as all we require is that each (featureID, category) key be mapped to a unique integer between 0 and the number of keys. In this exercise, any valid mapping is acceptable. Use zipWithIndex followed by collectAsMap.
In our sample dataset, one valid list of key-value tuples is: [((0, 'bear'), 0), ((2, 'salmon'), 1), ((1, 'tabby'), 2), ((2, 'mouse'), 3), ((0, 'mouse'), 4), ((0, 'cat'), 5), ((1, 'black'), 6)]. The dictionary defined in Part (1a) illustrates another valid mapping between keys and integers.
Note: We provide the code to convert the DataFrame to an RDD.
# TODO: Replace <FILL IN> with appropriate code
sample_ohe_dict = (sample_distinct_feats_df
.rdd
.map(lambda r: tuple(r[0]))
.zipWithIndex()
.collectAsMap())
print sample_ohe_dict
# TEST OHE Dictionary from distinct features (2b)
Test.assertEquals(sorted(sample_ohe_dict.keys()),
[(0, 'bear'), (0, 'cat'), (0, 'mouse'), (1, 'black'),
(1, 'tabby'), (2, 'mouse'), (2, 'salmon')],
'sample_ohe_dict has unexpected keys')
Test.assertEquals(sorted(sample_ohe_dict.values()), range(7), 'sample_ohe_dict has unexpected values')
Now use the code from Parts (2a) and (2b) to write a function that takes an input dataset and outputs an OHE dictionary. Then use this function to create an OHE dictionary for the sample dataset, and verify that it matches the dictionary from Part (2b).
# TODO: Replace <FILL IN> with appropriate code
def create_one_hot_dict(input_df):
"""Creates a one-hot-encoder dictionary based on the input data.
Args:
input_df (DataFrame with 'features' column): A DataFrame where each row contains a list of
(featureID, value) tuples.
Returns:
dict: A dictionary where the keys are (featureID, value) tuples and map to values that are
unique integers.
"""
retObj = (input_df
.select(explode('features'))
.distinct()
.rdd
.map(lambda r: tuple(r[0]))
.zipWithIndex()
.collectAsMap())
return retObj
sample_ohe_dict_auto = create_one_hot_dict(sample_data_df)
print sample_ohe_dict_auto
# TEST Automated creation of an OHE dictionary (2c)
Test.assertEquals(sorted(sample_ohe_dict_auto.keys()),
[(0, 'bear'), (0, 'cat'), (0, 'mouse'), (1, 'black'),
(1, 'tabby'), (2, 'mouse'), (2, 'salmon')],
'sample_ohe_dict_auto has unexpected keys')
Test.assertEquals(sorted(sample_ohe_dict_auto.values()), range(7),
'sample_ohe_dict_auto has unexpected values')
Before we can proceed, you'll first need to obtain the data from Criteo. Here is the link to Criteo's data sharing agreement: http://labs.criteo.com/downloads/2014-kaggle-display-advertising-challenge-dataset/. After you accept the agreement, you can obtain the download URL by right-clicking on the "Download Sample" button and clicking "Copy link address" or "Copy Link Location", depending on your browser.
download_criteo() function.TODO cell below that cell. Then, run the cell. It will download the data and make it available as a DataFrame, in variable raw_df.Note that the download should complete within 30 seconds.
WARNING: Be sure you get the "Download Sample" link, not the "Download" link!
# Nothing to edit here. Just run this cell.
def cleanup_old_downloads():
from fnmatch import fnmatch
# Clean up old downloaded files from dbfs:/tmp to prevent QUOTA_EXCEEDED errors.
for f in dbutils.fs.ls('/tmp'):
name = str(f.name)
if fnmatch(name, 'criteo_*'):
dbutils.fs.rm(str(f.path), recurse=True)
def download_criteo(url):
from io import BytesIO
import urllib2
import tarfile
import uuid
import tempfile
import random
import string
import os
if not url.endswith('dac_sample.tar.gz'):
raise Exception('Check your download URL. Are you downloading the sample dataset?')
cleanup_old_downloads()
# Create a random ID for the directory containing the downloaded file, to avoid any name clashes
# with any other clusters. (Might not be necessary, but, safety first...)
rng = random.SystemRandom()
tlds = ('.org', '.net', '.com', '.info', '.biz')
random_domain_name = (
''.join(rng.choice(string.letters + string.digits) for i in range(64)) +
rng.choice(tlds)
)
random_id = str(uuid.uuid3(uuid.NAMESPACE_DNS, random_domain_name)).replace('-', '_')
unique_id = str(uuid.uuid3(uuid.NAMESPACE_DNS, random_id)).replace('-', '_')
dbfs_dir = 'dbfs:/tmp/criteo_{0}'.format(unique_id)
dbfs_path = '{0}/data.txt'.format(dbfs_dir)
dbutils.fs.mkdirs(dbfs_dir)
# Download the tarball and unpack it.
tmp = BytesIO()
req = urllib2.Request(url, headers={'User-Agent': 'Databricks'})
url_handle = urllib2.urlopen(req)
tmp.write(url_handle.read())
tmp.seek(0)
tf = tarfile.open(fileobj=tmp)
dac_sample = tf.extractfile('dac_sample.txt')
dac_sample = '\n'.join([unicode(x.replace('\n', '').replace('\t', ',')) for x in dac_sample])
# Write the downloaded data to to dbfs:/tmp.
with tempfile.NamedTemporaryFile(mode='wb', delete=False, prefix='dac', suffix='.txt') as t:
t.write(dac_sample)
t.close()
dbutils.fs.cp('file://{0}'.format(t.name), dbfs_path)
os.unlink(t.name)
return dbfs_path
# TODO: Replace <FILL IN> with the appropriate URL. Then, run the following cell
# to download the data.
criteo_url = 'http://criteolabs.wpengine.com/wp-content/uploads/2015/04/dac_sample.tar.gz'
# Run this cell after you have filled in criteo_url.
if ('downloaded_data_file' not in locals()) or (downloaded_data_file is None):
downloaded_data_file = download_criteo(criteo_url)
if ('raw_df' in locals()) and (raw_df is not None):
print "raw_df is already loaded. Nothing to do. (Set raw_df=None to reload it, then re-run this cell.)"
else:
raw_df = sqlContext.read.text(downloaded_data_file).withColumnRenamed("value", "text")
print "raw_df initialized to read from {0}".format(downloaded_data_file)
raw_df.show()
We are now ready to start working with the actual CTR data, and our first task involves splitting it into training, validation, and test sets. Use the randomSplit method with the specified weights and seed to create DFs storing each of these datasets, and then cache each of these DFs, as we will be accessing them multiple times in the remainder of this lab. Finally, compute the size of each dataset.
# TODO: Replace <FILL IN> with appropriate code
weights = [.8, .1, .1]
seed = 42
# Use randomSplit with weights and seed
raw_train_df, raw_validation_df, raw_test_df = raw_df.randomSplit(weights, seed)
# Cache and count the DataFrames
n_train = raw_train_df.cache().count()
n_val = raw_validation_df.cache().count()
n_test = raw_test_df.cache().count()
print n_train, n_val, n_test, n_train + n_val + n_test
raw_df.show(1)
# TEST Loading and splitting the data (3a)
Test.assertTrue(all([raw_train_df.is_cached, raw_validation_df.is_cached, raw_test_df.is_cached]),
'you must cache the split data')
Test.assertEquals(n_train, 80178, 'incorrect value for n_train')
Test.assertEquals(n_val, 9887, 'incorrect value for n_val')
Test.assertEquals(n_test, 9935, 'incorrect value for n_test')
We will now parse the raw training data to create a DataFrame that we can subsequently use to create an OHE dictionary. Note from the show() command in Part (3a) that each raw data point is a string containing several fields separated by some delimiter. For now, we will ignore the first field (which is the 0-1 label), and parse the remaining fields (or raw features). To do this, complete the implemention of the parse_point function.
# TODO: Replace <FILL IN> with appropriate code
def parse_point(point):
"""Converts a comma separated string into a list of (featureID, value) tuples.
Note:
featureIDs should start at 0 and increase to the number of features - 1.
Args:
point (str): A comma separated string where the first value is the label and the rest
are features.
Returns:
list: A list of (featureID, value) tuples.
"""
parsedStr = point.split(",")
# print "parse_point: parsedStr: %s" % (parsedStr)
retObj = [(ix - 1, parsedStr[ix]) for ix in xrange(1, len(parsedStr))]
return retObj
print raw_df.select('text').first()[0]
print parse_point(raw_df.select('text').first()[0])
# TEST Extract features (3b)
Test.assertEquals(parse_point(raw_df.select('text').first()[0])[:3], [(0, u'1'), (1, u'1'), (2, u'5')],
'incorrect implementation of parse_point')
Next, we'll create a parse_raw_df function that creates a label column from the first value in the text and a feature column from the rest of the values. The feature column will be created using parse_point_udf, which we've provided and is based on your parse_point function. Note that to name your columns you should use alias. You can split the text field in raw_df using split and retrieve the first value of the resulting array with getItem. Be sure to call cast to cast the column value to double. Your parse_raw_df function should also cache the DataFrame it returns.
# TODO: Replace <FILL IN> with the appropriate code
from pyspark.sql.functions import udf, split
from pyspark.sql.types import ArrayType, StructType, StructField, LongType, StringType
parse_point_udf = udf(parse_point, ArrayType(StructType([StructField('_1', LongType()),
StructField('_2', StringType())])))
def parse_raw_df(raw_df):
"""Convert a DataFrame consisting of rows of comma separated text into labels and feature.
Args:
raw_df (DataFrame with a 'text' column): DataFrame containing the raw comma separated data.
Returns:
DataFrame: A DataFrame with 'label' and 'feature' columns.
"""
newDf = raw_df.select(split('text', ",")[0].cast("double").alias('label'),
parse_point_udf('text').alias("feature"))
retObj = newDf.cache()
return retObj
# Parse the raw training DataFrame
parsed_train_df =parse_raw_df(raw_train_df.select('text'))
from pyspark.sql.functions import (explode, col)
num_categories = (parsed_train_df
.select(explode('feature').alias('feature'))
.distinct()
.select(col('feature').getField('_1').alias('featureNumber'))
.groupBy('featureNumber')
.sum()
.orderBy('featureNumber')
.collect())
print num_categories[2][1]
# TEST Extract features (3c)
Test.assertTrue(parsed_train_df.is_cached, 'parse_raw_df should return a cached DataFrame')
Test.assertEquals(num_categories[2][1], 1706, 'incorrect implementation of parse_point or parse_raw_df')
Test.assertEquals(num_categories[32][1], 128, 'incorrect implementation of parse_point or parse_raw_df')
Note that parse_point returns a data point as a list of (featureID, category) tuples, which is the same format as the sample dataset studied in Parts 1 and 2 of this lab. Using this observation, create an OHE dictionary from the parsed training data using the function implemented in Part (2c). Note that we will assume for simplicity that all features in our CTR dataset are categorical.
# TODO: Replace <FILL IN> with appropriate code
ctr_ohe_dict = create_one_hot_dict(parsed_train_df.select(parsed_train_df.feature.alias('features')))
num_ctr_ohe_feats = len(ctr_ohe_dict.keys())
print num_ctr_ohe_feats
print ctr_ohe_dict[(0, '')]
# TEST Create an OHE dictionary from the dataset (3d)
Test.assertEquals(num_ctr_ohe_feats, 233941, 'incorrect number of features in ctr_ohe_dict')
Test.assertTrue((0, '') in ctr_ohe_dict, 'incorrect features in ctr_ohe_dict')
Now let's use this OHE dictionary, by starting with the training data that we've parsed into label and feature columns, to create one-hot-encoded features. Recall that we created a function ohe_udf_generator that can create the UDF that we need to convert row into features. Make sure that ohe_train_df contains a label and features column and is cached.
# TODO: Replace <FILL IN> with the appropriate code
ohe_dict_broadcast = sc.broadcast(ctr_ohe_dict)
ohe_dict_udf = ohe_udf_generator(ohe_dict_broadcast)
ohe_train_df = (parsed_train_df
.select('label', ohe_dict_udf(parsed_train_df.feature.alias('features')).alias('features'))
.cache())
print ohe_train_df.count()
print ohe_train_df.take(1)
# TEST Apply OHE to the dataset (3e)
Test.assertTrue('label' in ohe_train_df.columns and 'features' in ohe_train_df.columns, 'ohe_train_df should have label and features columns')
Test.assertTrue(ohe_train_df.is_cached, 'ohe_train_df should be cached')
num_nz = sum(parsed_train_df.rdd.map(lambda r: len(r[1])).take(5))
num_nz_alt = sum(ohe_train_df.rdd.map(lambda r: len(r[1].indices)).take(5))
Test.assertEquals(num_nz, num_nz_alt, 'incorrect value for ohe_train_df')
We will now visualize the number of times each of the 233,941 OHE features appears in the training data. We first compute the number of times each feature appears, then bucket the features by these counts. The buckets are sized by powers of 2, so the first bucket corresponds to features that appear exactly once ( \( \scriptsize 2^0 \) ), the second to features that appear twice ( \( \scriptsize 2^1 \) ), the third to features that occur between three and four ( \( \scriptsize 2^2 \) ) times, the fifth bucket is five to eight ( \( \scriptsize 2^3 \) ) times and so on. The scatter plot below shows the logarithm of the bucket thresholds versus the logarithm of the number of features that have counts that fall in the buckets.
from pyspark.sql.types import ArrayType, IntegerType
from pyspark.sql.functions import log
get_indices = udf(lambda sv: map(int, sv.indices), ArrayType(IntegerType()))
feature_counts = (ohe_train_df
.select(explode(get_indices('features')))
.groupBy('col')
.count()
.withColumn('bucket', log('count').cast('int'))
.groupBy('bucket')
.count()
.orderBy('bucket')
.collect())
import matplotlib.pyplot as plt
x, y = zip(*feature_counts)
x, y = x, np.log(y)
def prepare_plot(xticks, yticks, figsize=(10.5, 6), hide_labels=False, grid_color='#999999',
grid_width=1.0):
"""Template for generating the plot layout."""
plt.close()
fig, ax = plt.subplots(figsize=figsize, facecolor='white', edgecolor='white')
ax.axes.tick_params(labelcolor='#999999', labelsize='10')
for axis, ticks in [(ax.get_xaxis(), xticks), (ax.get_yaxis(), yticks)]:
axis.set_ticks_position('none')
axis.set_ticks(ticks)
axis.label.set_color('#999999')
if hide_labels: axis.set_ticklabels([])
plt.grid(color=grid_color, linewidth=grid_width, linestyle='-')
map(lambda position: ax.spines[position].set_visible(False), ['bottom', 'top', 'left', 'right'])
return fig, ax
# generate layout and plot data
fig, ax = prepare_plot(np.arange(0, 12, 1), np.arange(0, 14, 2))
ax.set_xlabel(r'$\log_e(bucketSize)$'), ax.set_ylabel(r'$\log_e(countInBucket)$')
plt.scatter(x, y, s=14**2, c='#d6ebf2', edgecolors='#8cbfd0', alpha=0.75)
display(fig)
We naturally would like to repeat the process from Part (3e), to compute OHE features for the validation and test datasets. However, we must be careful, as some categorical values will likely appear in new data that did not exist in the training data. To deal with this situation, update the one_hot_encoding() function from Part (1d) to ignore previously unseen categories, and then compute OHE features for the validation data. Remember that you can parse a raw DataFrame using parse_raw_df.
Note: you'll have to generate a new UDF using
ohe_udf_generatorso that the updatedone_hot_encodingfunction is used. And make sure to cacheohe_validation_df.
# TODO: Replace <FILL IN> with appropriate code
def one_hot_encoding(raw_feats, ohe_dict_broadcast, num_ohe_feats):
"""Produce a one-hot-encoding from a list of features and an OHE dictionary.
Note:
You should ensure that the indices used to create a SparseVector are sorted, and that the
function handles missing features.
Args:
raw_feats (list of (int, str)): The features corresponding to a single observation. Each
feature consists of a tuple of featureID and the feature's value. (e.g. sample_one)
ohe_dict_broadcast (Broadcast of dict): Broadcast variable containing a dict that maps
(featureID, value) to unique integer.
num_ohe_feats (int): The total number of unique OHE features (combinations of featureID and
value).
Returns:
SparseVector: A SparseVector of length num_ohe_feats with indices equal to the unique
identifiers for the (featureID, value) combinations that occur in the observation and
with values equal to 1.0.
"""
retObj = SparseVector(num_ohe_feats, [(ohe_dict_broadcast.value[ftrTpl], 1.) for ftrTpl in raw_feats \
if ohe_dict_broadcast.value.has_key(ftrTpl)])
return retObj
ohe_dict_missing_udf = ohe_udf_generator(ohe_dict_broadcast)
parsed_validation_df = parse_raw_df(raw_validation_df.select('text'))
ohe_validation_df = (parsed_validation_df
.select('label', ohe_dict_missing_udf(parsed_validation_df.feature.alias('features')).alias('features'))
.cache())
ohe_validation_df.count()
ohe_validation_df.show(1, truncate=False)
# TEST Handling unseen features (3f)
from pyspark.sql.functions import size, sum as sqlsum
Test.assertTrue(ohe_validation_df.is_cached, 'you need to cache ohe_validation_df')
num_nz_val = (ohe_validation_df
.select(sqlsum(size(get_indices('features'))))
.first()[0])
nz_expected = 365226
Test.assertEquals(num_nz_val, nz_expected, 'incorrect number of features: Got {0}, expected {1}'.format(num_nz_val, nz_expected))
We are now ready to train our first CTR classifier. A natural classifier to use in this setting is logistic regression, since it models the probability of a click-through event rather than returning a binary response, and when working with rare events, probabilistic predictions are useful.
First use LogisticRegression from the pyspark.ml package to train a model using ohe_train_df with the given hyperparameter configuration. LogisticRegression.fit returns a LogisticRegressionModel. Next, we'll use the LogisticRegressionModel.coefficients and LogisticRegressionModel.intercept attributes to print out some details of the model's parameters. Note that these are the names of the object's attributes and should be called using a syntax like model.coefficients for a given model.
# TODO: Replace <FILL IN> with appropriate code
standardization = False
elastic_net_param = 0.0
reg_param = .01
max_iter = 20
from pyspark.ml.classification import LogisticRegression
lr = LogisticRegression(maxIter = max_iter, regParam = reg_param, elasticNetParam = elastic_net_param,
standardization = standardization)
lr_model_basic = lr.fit(ohe_train_df)
print 'intercept: {0}'.format(lr_model_basic.intercept)
print 'length of coefficients: {0}'.format(len(lr_model_basic.coefficients))
sorted_coefficients = sorted(lr_model_basic.coefficients)[:5]
# TEST Logistic regression (4a)
Test.assertTrue(np.allclose(lr_model_basic.intercept, -1.23057928975), 'incorrect value for model intercept')
Test.assertTrue(np.allclose(sorted_coefficients,
[-0.1187459897152528, -0.10978507583227733, -0.10927080243659906, -0.10854213952664242, -0.10715533859341671]),
'incorrect value for model coefficients')
Throughout this lab, we will use log loss to evaluate the quality of models. Log loss is defined as: \[ \scriptsize \ell_{log}(p, y) = \begin{cases} -\log (p) & \text{if } y = 1 \\ -\log(1-p) & \text{if } y = 0 \end{cases} \] where \( \scriptsize p\) is a probability between 0 and 1 and \( \scriptsize y\) is a label of either 0 or 1. Log loss is a standard evaluation criterion when predicting rare-events such as click-through rate prediction (it is also the criterion used in the Criteo Kaggle competition).
Write a function add_log_loss to a DataFrame, and evaluate it on some sample inputs. This does not require a UDF. You can perform conditional branching with DataFrame columns using when.
# Some example data
example_log_loss_df = sqlContext.createDataFrame([(.5, 1), (.5, 0), (.99, 1), (.99, 0), (.01, 1),
(.01, 0), (1., 1), (.0, 1), (1., 0)], ['p', 'label'])
example_log_loss_df.show()
# TODO: Replace <FILL IN> with appropriate code
from pyspark.sql.functions import when, log, col
epsilon = 1e-16
def add_log_loss(df):
"""Computes and adds a 'log_loss' column to a DataFrame using 'p' and 'label' columns.
Note:
log(0) is undefined, so when p is 0 we add a small value (epsilon) to it and when
p is 1 we subtract a small value (epsilon) from it.
Args:
df (DataFrame with 'p' and 'label' columns): A DataFrame with a probability column
'p' and a 'label' column that corresponds to y in the log loss formula.
Returns:
DataFrame: A new DataFrame with an additional column called 'log_loss' where 'log_loss' column contains the loss value as explained above.
"""
newDF = df.select("*", when(df.label == 1, 0. - log(df.p + epsilon)).\
otherwise(0. - log(1. - df.p + epsilon)).alias('log_loss'))
retObj = newDF
return retObj
add_log_loss(example_log_loss_df).show()
# TEST Log loss (4b)
log_loss_values = add_log_loss(example_log_loss_df).select('log_loss').rdd.map(lambda r: r[0]).collect()
Test.assertTrue(np.allclose(log_loss_values[:-2],
[0.6931471805599451, 0.6931471805599451, 0.010050335853501338, 4.60517018598808,
4.605170185988081, 0.010050335853501338, -0.0]), 'log loss is not correct')
Test.assertTrue(not(any(map(lambda x: x is None, log_loss_values[-2:]))),
'log loss needs to bound p away from 0 and 1 by epsilon')
Next we will use the function we wrote in Part (4b) to compute the baseline log loss on the training data. A very simple yet natural baseline model is one where we always make the same prediction independent of the given datapoint, setting the predicted value equal to the fraction of training points that correspond to click-through events (i.e., where the label is one). Compute this value (which is simply the mean of the training labels), and then use it to compute the training log loss for the baseline model.
Note: you'll need to add a
pcolumn to theohe_train_dfDataFrame so that it can be used in your function from Part (4b). To represent a constant value as a column you can use the lit function to wrap the value.
# TODO: Replace <FILL IN> with appropriate code
# Note that our dataset has a very high click-through rate by design
# In practice click-through rate can be one to two orders of magnitude lower
from pyspark.sql.functions import lit
class_one_frac_train = (ohe_train_df
.groupBy()
.mean('label')
.collect())[0][0]
# print class_one_frac_train
# print type(class_one_frac_train)
print 'Training class one fraction = {0:.3f}'.format(class_one_frac_train)
log_loss_tr_base = (add_log_loss(ohe_train_df.select('*', lit(class_one_frac_train).alias('p')))
.groupBy()
.mean('log_loss')
.collect())[0][0]
print 'Baseline Train Logloss = {0:.3f}\n'.format(log_loss_tr_base)
# TEST Baseline log loss (4c)
expected_frac = 0.226209184564
expected_log_loss = 0.53465512785
Test.assertTrue(np.allclose(class_one_frac_train, expected_frac), 'incorrect value for class_one_frac_train. Got {0}, expected {1}'.format(class_one_frac_train, expected_frac))
Test.assertTrue(np.allclose(log_loss_tr_base, expected_log_loss), 'incorrect value for log_loss_tr_base. Got {0}, expected {1}'.format(log_loss_tr_base, expected_log_loss))
In order to compute the log loss for the model we trained in Part (4a), we need to write code to generate predictions from this model. Write a function that computes the raw linear prediction from this logistic regression model and then passes it through a sigmoid function \( \scriptsize \sigma(t) = (1+ e^{-t})^{-1} \) to return the model's probabilistic prediction. Then compute probabilistic predictions on the training data.
Note that when incorporating an intercept into our predictions, we simply add the intercept to the value of the prediction obtained from the weights and features. Alternatively, if the intercept was included as the first weight, we would need to add a corresponding feature to our data where the feature has the value one. This is not the case here.
# TODO: Replace <FILL IN> with appropriate code
from pyspark.sql.types import DoubleType
from math import exp # exp(-t) = e^-t
def add_probability(df, model):
"""Adds a probability column ('p') to a DataFrame given a model"""
coefficients_broadcast = sc.broadcast(model.coefficients)
intercept = model.intercept
def get_p(features):
"""Calculate the probability for an observation given a list of features.
Note:
We'll bound our raw prediction between 20 and -20 for numerical purposes.
Args:
features: the features
Returns:
float: A probability between 0 and 1.
"""
# Compute the raw value
raw_prediction = intercept + coefficients_broadcast.value.dot(features)
# Bound the raw value between 20 and -20
raw_prediction = min(20, max(-20, raw_prediction))
# Return the probability
probability = 1.0 / (1 + exp(- raw_prediction))
return probability
get_p_udf = udf(get_p, DoubleType())
return df.withColumn('p', get_p_udf('features'))
add_probability_model_basic = lambda df: add_probability(df, lr_model_basic)
training_predictions = add_probability_model_basic(ohe_train_df).cache()
training_predictions.show(5)
# TEST Predicted probability (4d)
expected = 18168.793778
got = training_predictions.selectExpr('sum(p)').first()[0]
Test.assertTrue(np.allclose(got, expected),
'incorrect value for training_predictions. Got {0}, expected {1}'.format(got, expected))
We are now ready to evaluate the quality of the model we trained in Part (4a). To do this, first write a general function that takes as input a model and data, and outputs the log loss. Note that the log loss for multiple observations is the mean of the individual log loss values. Then run this function on the OHE training data, and compare the result with the baseline log loss.
# TODO: Replace <FILL IN> with appropriate code
def evaluate_results(df, model, baseline=None):
"""Calculates the log loss for the data given the model.
Note:
If baseline has a value the probability should be set to baseline before
the log loss is calculated. Otherwise, use add_probability to add the
appropriate probabilities to the DataFrame.
Args:
df (DataFrame with 'label' and 'features' columns): A DataFrame containing
labels and features.
model (LogisticRegressionModel): A trained logistic regression model. This
can be None if baseline is set.
baseline (float): A baseline probability to use for the log loss calculation.
Returns:
float: Log loss for the data.
"""
if (model != None):
with_probability_df = add_probability(df, model)
else:
with_probability_df = df.withColumn('p', lit(baseline))
with_log_loss_df = add_log_loss(with_probability_df)
log_loss = with_log_loss_df.groupBy().mean('log_loss').collect()[0][0]
return log_loss
log_loss_train_model_basic = evaluate_results(ohe_train_df, lr_model_basic)
print ('OHE Features Train Logloss:\n\tBaseline = {0:.3f}\n\tLogReg = {1:.3f}'
.format(log_loss_tr_base, log_loss_train_model_basic))
# TEST Evaluate the model (4e)
expected_log_loss = 0.474685722542
Test.assertTrue(np.allclose(log_loss_train_model_basic, expected_log_loss),
'incorrect value for log_loss_train_model_basic. Got {0}, expected {1}'.format(log_loss_train_model_basic, expected_log_loss))
expected_res = 0.6931471805600546
res = evaluate_results(ohe_train_df, None, 0.5)
Test.assertTrue(np.allclose(res, expected_res),
'evaluate_results needs to handle baseline models. Got {0}, expected {1}'.format(res, expected_res))
Next, using the evaluate_results function compute the validation log loss for both the baseline and logistic regression models. Notably, the baseline model for the validation data should still be based on the label fraction from the training dataset.
# TODO: Replace <FILL IN> with appropriate code
log_loss_val_base = evaluate_results(ohe_validation_df, None, class_one_frac_train)
log_loss_val_l_r0 = evaluate_results(ohe_validation_df, lr_model_basic)
print ('OHE Features Validation Logloss:\n\tBaseline = {0:.3f}\n\tLogReg = {1:.3f}'
.format(log_loss_val_base, log_loss_val_l_r0))
# TEST Validation log loss (4f)
expected_val_base = 0.544167185783
Test.assertTrue(np.allclose(log_loss_val_base, expected_val_base),
'incorrect value for log_loss_val_base. Got {0}, expected {1}'.format(log_loss_val_base, expected_val_base))
expected_val_model_basic = 0.487967958915
Test.assertTrue(np.allclose(log_loss_val_l_r0, expected_val_model_basic),
'incorrect value for log_loss_val_l_r0. Got {0}, expected {1}'.format(log_loss_val_l_r0, expected_val_model_basic))
We will now visualize how well the model predicts our target. To do this we generate a plot of the ROC curve. The ROC curve shows us the trade-off between the false positive rate and true positive rate, as we liberalize the threshold required to predict a positive outcome. A random model is represented by the dashed line.
labels_and_scores = add_probability_model_basic(ohe_validation_df).select('label', 'p')
labels_and_weights = labels_and_scores.collect()
labels_and_weights.sort(key=lambda (k, v): v, reverse=True)
labels_by_weight = np.array([k for (k, v) in labels_and_weights])
length = labels_by_weight.size
true_positives = labels_by_weight.cumsum()
num_positive = true_positives[-1]
false_positives = np.arange(1.0, length + 1, 1.) - true_positives
true_positive_rate = true_positives / num_positive
false_positive_rate = false_positives / (length - num_positive)
# Generate layout and plot data
fig, ax = prepare_plot(np.arange(0., 1.1, 0.1), np.arange(0., 1.1, 0.1))
ax.set_xlim(-.05, 1.05), ax.set_ylim(-.05, 1.05)
ax.set_ylabel('True Positive Rate (Sensitivity)')
ax.set_xlabel('False Positive Rate (1 - Specificity)')
plt.plot(false_positive_rate, true_positive_rate, color='#8cbfd0', linestyle='-', linewidth=3.)
plt.plot((0., 1.), (0., 1.), linestyle='--', color='#d6ebf2', linewidth=2.) # Baseline model
display(fig)
As we just saw, using a one-hot-encoding featurization can yield a model with good statistical accuracy. However, the number of distinct categories across all features is quite large -- recall that we observed 233K categories in the training data in Part (3c). Moreover, the full Kaggle training dataset includes more than 33M distinct categories, and the Kaggle dataset itself is just a small subset of Criteo's labeled data. Hence, featurizing via a one-hot-encoding representation would lead to a very large feature vector. To reduce the dimensionality of the feature space, we will use feature hashing.
Below is the hash function that we will use for this part of the lab. We will first use this hash function with the three sample data points from Part (1a) to gain some intuition. Specifically, run code to hash the three sample points using two different values for numBuckets and observe the resulting hashed feature dictionaries.
from collections import defaultdict
import hashlib
def hash_function(raw_feats, num_buckets, print_mapping=False):
"""Calculate a feature dictionary for an observation's features based on hashing.
Note:
Use print_mapping=True for debug purposes and to better understand how the hashing works.
Args:
raw_feats (list of (int, str)): A list of features for an observation. Represented as
(featureID, value) tuples.
num_buckets (int): Number of buckets to use as features.
print_mapping (bool, optional): If true, the mappings of featureString to index will be
printed.
Returns:
dict of int to float: The keys will be integers which represent the buckets that the
features have been hashed to. The value for a given key will contain the count of the
(featureID, value) tuples that have hashed to that key.
"""
mapping = { category + ':' + str(ind):
int(int(hashlib.md5(category + ':' + str(ind)).hexdigest(), 16) % num_buckets)
for ind, category in raw_feats}
if(print_mapping): print mapping
def map_update(l, r):
l[r] += 1.0
return l
sparse_features = reduce(map_update, mapping.values(), defaultdict(float))
return dict(sparse_features)
# Reminder of the sample values:
# sample_one = [(0, 'mouse'), (1, 'black')]
# sample_two = [(0, 'cat'), (1, 'tabby'), (2, 'mouse')]
# sample_three = [(0, 'bear'), (1, 'black'), (2, 'salmon')]
# TODO: Replace <FILL IN> with appropriate code
# Use four buckets
samp_one_four_buckets = hash_function(sample_one, 4, True)
samp_two_four_buckets = hash_function(sample_two, 4, True)
samp_three_four_buckets = hash_function(sample_three, 4, True)
# Use one hundred buckets
samp_one_hundred_buckets = hash_function(sample_one, 100, True)
samp_two_hundred_buckets = hash_function(sample_two, 100, True)
samp_three_hundred_buckets = hash_function(sample_three, 100, True)
print '\n\t\t 4 Buckets \t\t\t 100 Buckets'
print 'SampleOne:\t {0}\t\t\t {1}'.format(samp_one_four_buckets, samp_one_hundred_buckets)
print 'SampleTwo:\t {0}\t\t {1}'.format(samp_two_four_buckets, samp_two_hundred_buckets)
print 'SampleThree:\t {0}\t {1}'.format(samp_three_four_buckets, samp_three_hundred_buckets)
# TEST Hash function (5a)
Test.assertEquals(samp_one_four_buckets, {3: 2.0}, 'incorrect value for samp_one_four_buckets')
Test.assertEquals(samp_three_hundred_buckets, {80: 1.0, 82: 1.0, 51: 1.0},
'incorrect value for samp_three_hundred_buckets')
Next we will use this hash function to create hashed features for our CTR datasets. Use the provided UDF to create a function that takes in a DataFrame and returns labels and hashed features. Then use this function to create new training, validation and test datasets with hashed features.
# TODO: Replace <FILL IN> with appropriate code
from pyspark.mllib.linalg import Vectors
num_hash_buckets = 2 ** 15
# UDF that returns a vector of hashed features given an Array of tuples
tuples_to_hash_features_udf = udf(lambda x: Vectors.sparse(num_hash_buckets, hash_function(x, num_hash_buckets)), VectorUDT())
def add_hashed_features(df):
"""Return a DataFrame with labels and hashed features.
Note:
Make sure to cache the DataFrame that you are returning.
Args:
df (DataFrame with 'tuples' column): A DataFrame containing the tuples to be hashed.
Returns:
DataFrame: A DataFrame with a 'label' column and a 'features' column that contains a
SparseVector of hashed features.
"""
return df.select('label', tuples_to_hash_features_udf('feature').alias('features'))
hash_train_df = add_hashed_features(parsed_train_df)
hash_validation_df = add_hashed_features(parsed_validation_df)
# hash_test_df = add_hashed_features(parsed_test_df)
hash_test_df = add_hashed_features(parse_raw_df(raw_test_df.select('text')))
hash_train_df.show()
# TEST Creating hashed features (5b)
hash_train_df_feature_sum = sum(hash_train_df
.rdd
.map(lambda r: sum(r[1].indices))
.take(10))
hash_validation_df_feature_sum = sum(hash_validation_df
.rdd
.map(lambda r: sum(r[1].indices))
.take(10))
hash_test_df_feature_sum = sum(hash_test_df
.rdd
.map(lambda r: sum(r[1].indices))
.take(10))
expected_train_sum = 6499660
Test.assertEquals(hash_train_df_feature_sum, expected_train_sum,
'incorrect number of features in hash_train_df. Got {0}, expected {1}'.format(hash_train_df_feature_sum, expected_train_sum))
expected_validation_sum = 6725232
Test.assertEquals(hash_validation_df_feature_sum, expected_validation_sum,
'incorrect number of features in hash_validation_df. Got {0}, expected {1}'.format(hash_validation_df_feature_sum, expected_validation_sum))
expected_test_sum = 6885806
Test.assertEquals(hash_test_df_feature_sum, expected_test_sum, 'incorrect number of features in hash_test_df. Got {0}, expected {1}'.format(hash_test_df_feature_sum, expected_test_sum))
Since we have 33K hashed features versus 233K OHE features, we should expect OHE features to be sparser. Verify this hypothesis by computing the average sparsity of the OHE and the hashed training datasets.
Note that if you have a SparseVector named sparse, calling len(sparse) returns the total number of features, not the number features with entries. SparseVector objects have the attributes indices and values that contain information about which features are nonzero. Continuing with our example, these can be accessed using sparse.indices and sparse.values, respectively.
# TODO: Replace <FILL IN> with appropriate code
def vector_feature_sparsity(sparse_vector):
"""Calculates the sparsity of a SparseVector.
Args:
sparse_vector (SparseVector): The vector containing the features.
Returns:
float: The ratio of features found in the vector to the total number of features.
"""
return len(sparse_vector.indices) * 1.0 / len(sparse_vector)
feature_sparsity_udf = udf(vector_feature_sparsity, DoubleType())
a_sparse_vector = Vectors.sparse(5, {0: 1.0, 3: 1.0})
a_sparse_vector_sparsity = vector_feature_sparsity(a_sparse_vector)
print 'This vector should have sparsity 2/5 or .4.'
print 'Sparsity = {0:.2f}.'.format(a_sparse_vector_sparsity)
# TEST Sparsity (5c)
Test.assertEquals(a_sparse_vector_sparsity, .4,
'incorrect value for a_sparse_vector_sparsity')
Now that we have a function to calculate vector sparsity, we'll wrap it in a UDF and apply it to an entire DataFrame to obtain the average sparsity for features in that DataFrame. We'll use the function to find the average sparsity of the one-hot-encoded training DataFrame and of the hashed training DataFrame.
# TODO: Replace <FILL IN> with appropriate code
feature_sparsity_udf = udf(vector_feature_sparsity, DoubleType())
def get_sparsity(df):
"""Calculates the average sparsity for the features in a DataFrame.
Args:
df (DataFrame with 'features' column): A DataFrame with sparse features.
Returns:
float: The average feature sparsity.
"""
return (df
.select(feature_sparsity_udf('features'))
.groupBy()
.mean()
.collect())[0][0]
average_sparsity_ohe = get_sparsity(ohe_train_df)
average_sparsity_hash = get_sparsity(hash_train_df)
print 'Average OHE Sparsity: {0:.7e}'.format(average_sparsity_ohe)
print 'Average Hash Sparsity: {0:.7e}'.format(average_sparsity_hash)
# TEST Sparsity (5d)
expected_ohe = 1.6670941e-04
Test.assertTrue(np.allclose(average_sparsity_ohe, expected_ohe),
'incorrect value for average_sparsity_ohe. Got {0}, expected {1}'.format(average_sparsity_ohe, expected_ohe))
expected_hash = 1.1896565e-03
Test.assertTrue(np.allclose(average_sparsity_hash, expected_hash),
'incorrect value for average_sparsity_hash. Got {0}, expected {1}'.format(average_sparsity_hash, expected_hash))
Now let's train a logistic regression model using the hashed training features. Use the hyperparameters provided, fit the model, and then evaluate the log loss on the training set.
# TODO: Replace <FILL IN> with appropriate code
standardization = False
elastic_net_param = 0.7
reg_param = .001
max_iter = 20
# lr_hash = (<FILL IN>)
lr_hash = LogisticRegression(maxIter = max_iter, regParam = reg_param, elasticNetParam = elastic_net_param,
standardization = standardization)
lr_model_hashed = lr_hash.fit(hash_train_df)
# lr_model_hashed = <FILL IN>
print 'intercept: {0}'.format(lr_model_hashed.intercept)
print len(lr_model_hashed.coefficients)
log_loss_train_model_hashed = evaluate_results(hash_train_df, lr_model_hashed)
print ('OHE Features Train Logloss:\n\tBaseline = {0:.3f}\n\thashed = {1:.3f}'
.format(log_loss_tr_base, log_loss_train_model_hashed))
# TEST Logistic model with hashed features (5e)
expected = 0.46545524487
Test.assertTrue(np.allclose(log_loss_train_model_hashed, expected),
'incorrect value for log_loss_train_model_hashed. Got {0}, expected {1}'.format(log_loss_train_model_hashed, expected))
Finally, evaluate the model from Part (5e) on the test set. Compare the resulting log loss with the baseline log loss on the test set, which can be computed in the same way that the validation log loss was computed in Part (4f).
# TODO: Replace <FILL IN> with appropriate code
# Log loss for the best model from (5e)
log_loss_test = evaluate_results(hash_test_df, lr_model_hashed)
# Log loss for the baseline model
class_one_frac_test = class_one_frac_train
print 'Class one fraction for test data: {0}'.format(class_one_frac_test)
log_loss_test_baseline = evaluate_results(hash_test_df, None, class_one_frac_test)
print ('Hashed Features Test Log Loss:\n\tBaseline = {0:.3f}\n\tLogReg = {1:.3f}'
.format(log_loss_test_baseline, log_loss_test))
log_loss_test_baseline = 0.530363901139
# TEST Evaluate on the test set (5f)
expected_test_baseline = 0.530363901139
Test.assertTrue(np.allclose(log_loss_test_baseline, expected_test_baseline),
'incorrect value for log_loss_test_baseline. Got {0}, expected {1}'.format(log_loss_test_baseline, expected_test_baseline))
expected_test = 0.458838771351
Test.assertTrue(np.allclose(log_loss_test, expected_test),
'incorrect value for log_loss_test. Got {0}, expected {1}'.format(log_loss_test, expected_test))